org.expasy.jpl.commons.base.io
Class TabFileReader

java.lang.Object
  org.expasy.jpl.commons.base.io.TabFileReader

All Implemented Interfaces:

Parser<File>

public final class TabFileReader
extends Object
implements Parser<File>

Constructor Summary

TabFileReader()
Constructor

Method Summary

boolean	doReadHeader() Ask whether header line is read
ArrayList<String>	getColomnNames() Get column names.
String	getSeparator() Get separator
ArrayList<ArrayList<Double>>	getValues() Get values
static TabFileReader	newInstance() retrieve new instance
void	parse(File file) parse the content
void	setReadHeader(boolean readHeader) Set flag that defines whether to read heather
void	setSeparator(String separator) Set separator

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TabFileReader

public TabFileReader()

Constructor

Method Detail

newInstance

public static TabFileReader newInstance()

retrieve new instance

Returns:

new instance

parse

public void parse(File file)
           throws ParseException

Description copied from interface: Parser

parse the content

Specified by:

parse in interface Parser<File>

Throws:

ParseException

getColomnNames

public ArrayList<String> getColomnNames()

Get column names. Returns null if no header is read.

Returns:

column names

getValues

public ArrayList<ArrayList<Double>> getValues()

Get values

Returns:

values

setReadHeader

public void setReadHeader(boolean readHeader)

Set flag that defines whether to read heather

Parameters:

readHeader - flag

doReadHeader

public boolean doReadHeader()

Ask whether header line is read

Returns:

readHeader flag

setSeparator

public void setSeparator(String separator)

Set separator

Parameters:

separator - Column separator

getSeparator

public String getSeparator()

Get separator

Returns:

column separator