Uses of Class
org.expasy.jpl.core.mol.polymer.pept.PeptideTypeImpl

Packages that use PeptideTypeImpl

org.expasy.jpl.core.mol.polymer.pept	Provides peptide sequence objects and tools.
org.expasy.jpl.core.mol.polymer.pept.cutter	Provides peptide cutters.
org.expasy.jpl.core.ms.spectrum.annot	Provides MS fragment annotation objects and manager.

Uses of PeptideTypeImpl in org.expasy.jpl.core.mol.polymer.pept

Fields in org.expasy.jpl.core.mol.polymer.pept declared as PeptideTypeImpl

static PeptideTypeImpl	PeptideTypeImpl.A
static PeptideTypeImpl	PeptideTypeImpl.AX
static PeptideTypeImpl	PeptideTypeImpl.AY
static PeptideTypeImpl	PeptideTypeImpl.AZ
static PeptideTypeImpl	PeptideTypeImpl.B
static PeptideTypeImpl	PeptideTypeImpl.BX
static PeptideTypeImpl	PeptideTypeImpl.BY
static PeptideTypeImpl	PeptideTypeImpl.BZ
static PeptideTypeImpl	PeptideTypeImpl.C
static PeptideTypeImpl	PeptideTypeImpl.CX
static PeptideTypeImpl	PeptideTypeImpl.CY
static PeptideTypeImpl	PeptideTypeImpl.CZ
static PeptideTypeImpl	PeptideTypeImpl.I
static PeptideTypeImpl	PeptideTypeImpl.P
static PeptideTypeImpl	PeptideTypeImpl.X
static PeptideTypeImpl	PeptideTypeImpl.Y
static PeptideTypeImpl	PeptideTypeImpl.Z

Methods in org.expasy.jpl.core.mol.polymer.pept that return PeptideTypeImpl

static PeptideTypeImpl	PeptideTypeImpl.getImmoniumInstance()
PeptideTypeImpl	Peptide.getPeptideType()
PeptideTypeImpl	AASequence.getPeptideType()
static PeptideTypeImpl	PeptideTypeImpl.getPrecursorInstance()
static PeptideTypeImpl	PeptideTypeImpl.valueOf(char c1, char c2) Get a peptide type given Nt/Ct name characters.
static PeptideTypeImpl	PeptideTypeImpl.valueOf(Peptide peptide) Get the peptide type of the given peptide.
static PeptideTypeImpl	PeptideTypeImpl.valueOf(TerminusTypeImpl.TypeN nTerm, TerminusTypeImpl.TypeC cTerm) Get a peptide type given two terminus type.

Uses of PeptideTypeImpl in org.expasy.jpl.core.mol.polymer.pept.cutter

Methods in org.expasy.jpl.core.mol.polymer.pept.cutter that return PeptideTypeImpl

PeptideTypeImpl

DigestedPeptide.getPeptideType()

Uses of PeptideTypeImpl in org.expasy.jpl.core.ms.spectrum.annot

Constructors in org.expasy.jpl.core.ms.spectrum.annot with parameters of type PeptideTypeImpl

FragmentAnnotationGeneric.Builder(PeptideTypeImpl ionType, int num)